PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00274.1.g00380.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 638aa    MW: 67401.2 Da    PI: 8.2472
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00274.1.g00380.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-30377435259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed+ v+++tYeg+Hnh+
  Zpz_sc00274.1.g00380.1.am.mk 377 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKAVLVTTYEGTHNHP 435
                                   7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.3E-33361437IPR003657WRKY domain
SuperFamilySSF1182901.12E-27369437IPR003657WRKY domain
PROSITE profilePS5081129.78371437IPR003657WRKY domain
SMARTSM007748.5E-37376436IPR003657WRKY domain
PfamPF031061.2E-26378435IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    Send to blast
MCSYGFVASS RPLPKSQQPS YRSTWTRFPP ASGTCHADAP SDAAGPPSPT RSHWSNSLLP  60
ADPSPFLTSP KSKPFRFTFR ARYVVVIDLV PLVRLVRPLA MRPPPIPSMD LAASRTQHHH  120
RQEEEEEEEK AMILSERGSR LRRSEIREVD FFSTGGGALA SPREREEGRG EDDGAGGNGG  180
GGSRERHGPS TGRDDNVVNT ALDLLTTAGA ANTVVGHGGG EGTVAGRTDH REVDMATVEG  240
ALRQAGEENR RLRQRLDDLT RSYSTLYYQL LQAQQQHQAS SASTNSTLLH QQQFTDPRML  300
SPVIRPPAPV VLDGGSDRAS SDGGSGEAED RRGQQDGTGT PERGENAEGG AGAAAADAPC  360
RRARVSVRAR SEAPMISDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED  420
KAVLVTTYEG THNHPLPPAA AAMAKTTSAA AAMLLSGPAV SRDAAAGAMF GHHHVVAPPP  480
PPLFHHPYGM GGATLSASAP FPTITLDLTH SPTAPSSVGG LFQQRPPSSV PTLPFPMYGF  540
PGHRPLMPPP TTVIGTDGRS RSALETMTAA ITSDPNFTTV LAAALSSIMA GGADGASRLG  600
AGDAGDANGE GAAEPTTAAA ARETALRTLL QRLHESRH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-22367437877Probable WRKY transcription factor 4
2lex_A3e-22367437877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012699836.11e-160PREDICTED: probable WRKY transcription factor 47
TrEMBLK3Z7E81e-116K3Z7E8_SETIT; Uncharacterized protein
STRINGSi022468m1e-116(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43583260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.13e-50WRKY family protein